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The 6th UK Affymetrix Users' Group Meeting
UCD Conway Institute of Biomolecular and Biomedical Research - Dublin
Thursday 21st June - Friday 22nd June 2007
 
Day 1 Thursday 21st June 2007
 
9:30 - 10:30 Coffee and Registration
10:30 - 10:35 Welcome from the Steering Committee
 
10:35 - 12:30 Session 1
10:35 - 11:05 SNPs and Genes: mining the paediatric brain tumour genome to identify novel markers
Vikki Rand, Children's Brain Tumour Research Centre, University of Nottingham
11:05 - 11:35 Exon Array Data QC and Validation by qPCR
Stuart Pepper, CR-UK, PICR, Manchester
11:35 - 12:05 Genome-wide Mapping of Estrogen Receptor binding and activity
Jason Carroll, CR-UK, Cambridge Research Institute
12:05 - 12:30 Affymetrix Presentation
Fiona Brew, Affymetrix
 
12:30 - 13:30 Lunch
 
13:30 - 15:00 Session 2
13:30 - 13:50 Agilent Software Presentation
Neil Ward, Agilent
13:50 - 14:10 Agilent Chip-on-chip Platform
Jim Collins, Agilent R&D Group Manager, Genomics
14:10 - 14:30 Illumina Presentation
Fahim Amini, Illumina
14:30 - 14:45 siRNAs and miRNAs: Understanding gene function and regulation
Stephanie Brooking, Ambion
14:45 - 15:00 Applied Biosystems Presentation
John Sherlock
 
15:00 - 15:30 Break for coffee
 
15:30 - 17:00 Session 3
15:30 - 16:00 Deciphering c-Myc Regulated Gene Networks in Two Distinct Tissues
Sam Robson, University of Warwick
16:00 - 16:30 Exon Array Analysis using Exonmap
Sian Dibben, CR-UK, PICR, Manchester
16:30 - 17:00 The use of mapping arrays for the detection of allelic imbalance in childhood leukaemia
Andy Hall, Northern Institute for Cancer Research, Nottingham
17:00 - UKAffy only session
 
20:00 - Dinner at Tante Zoes Restaurant
 
Day 2 -- Friday 22nd June 2007
 
09:00 - 11:00 Session 1
09:00 - 09:20 New Users Q+A Session
09:20 - 09:50 Methylation and Tiling Arrays
James Flanagan, Wolfson Institute for Biomedical Research, UCL
09:50 - 10:10 ArrayAssist™ Exon: Stratagene Microarray Analysis Software
Delphine Pages, Technical Services Scientist, Stratagene Europe
10:10 - 10:40 Break for coffee
10:40 - 11:00 Partek Software Presentation
Donald J. Meyer, Partek
 
11:00 - 12:20 Session 2
11:00 - 11:20 Making sense of microarray gene lists using text mining and over-representation analysis
Hui Sun Leong, Department of Pathology, Cardiff University
11:20 - 11:40 Analysis of microRNA profiling using Invitrogen NCode™ Spotted Arrays
Tony Brooks, CSC/IC Microarray Centre, Hammersmith Hospital
11:40 - 12:00 Identifying Tissue Specific Alternative Exon Splicing and Differential Gene Expression
Sonia Shah, Bloomsbury Centre for Bioinformatics, UCL
12:00 - 12:20 Why does my array result not match my qPCR result?
Onno Bakker, Academic Medical Centre, Amsterdam
 
12.20 - Closing Remarks


Last updated 12th June 2007
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